Family of bacteria
The Nakamurella is a genus of bacteria.[1]
Phylogeny
The currently accepted taxonomy is based on the List of Prokaryotic names with Standing in Nomenclature (LPSN)[2] and National Center for Biotechnology Information (NCBI)[4]
| 16S rRNA based LTP_08_2023[5][6][7]
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120 marker proteins based GTDB 08-RS214[8][9][10]
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| Nakamurella
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N. endophytica Tuo et al. 2016
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N. intestinalis Kim et al. 2017
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N. silvestris França et al. 2016
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N. antarctica Da et al. 2019
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N. deserti Liu et al. 2019
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N. multipartita (Yoshimi et al. 1996) Tao et al. 2004
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N. panacisegetis Kim et al. 2012
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N. flava Yan et al. 2020
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N. leprariae An et al. 2022
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N. flavida (Yoon et al. 2007) Kim et al. 2012
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N. aerolata Chaudhary et al. 2021
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N. lactea (Lee et al. 2008) Kim et al. 2012
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| Nakamurella
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N. endophytica
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N. panacisegetis
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Species incertae sedis:
- N. alba corrig. Jiang et al. 2023
See also
References
- ^ a b c Tao TS, Yue YY, Chen WX, Chen WF (2004). "Proposal of Nakamurella gen. nov. as a substitute for the bacterial genus Microsphaera Yoshimi et al. 1996 and Nakamurellaceae fam. nov. as a substitute for the illegitimate bacterial family Microsphaeraceae Rainey et al. 1997". Int J Syst Evol Microbiol. 54 (Pt 3): 999–1000. doi:10.1099/ijs.0.02933-0. PMID 15143055.
- ^ a b A.C. Parte; et al. "Nakamurella". List of Prokaryotic names with Standing in Nomenclature (LPSN). Retrieved 2023-09-09.
- ^ Sen A, Daubin V, Abrouk D, Gifford I, Berry AM, Normand P (2014). "Phylogeny of the class Actinobacteria revisited in the light of complete genomes. The orders "Frankiales" and Micrococcales should be split into coherent entities: Proposal of Frankiales ord. nov., Geodermatophilales ord. nov., Acidothermales ord. nov. and Nakamurellales ord. nov". Int J Syst Evol Microbiol. 64 (Pt 11): 3821–3832. doi:10.1099/ijs.0.063966-0. PMID 25168610.
- ^ Sayers; et al. "Nakamurella". National Center for Biotechnology Information (NCBI) taxonomy database. Retrieved 2023-09-09.
- ^ "The LTP". Retrieved 20 November 2023.
- ^ "LTP_all tree in newick format". Retrieved 20 November 2023.
- ^ "LTP_08_2023 Release Notes" (PDF). Retrieved 20 November 2023.
- ^ "GTDB release 08-RS214". Genome Taxonomy Database. Retrieved 10 May 2023.
- ^ "bac120_r214.sp_label". Genome Taxonomy Database. Retrieved 10 May 2023.
- ^ "Taxon History". Genome Taxonomy Database. Retrieved 10 May 2023.
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Terrabacteria
BV1, BV3, BV5 | | others | |
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| Cyanoprokaryota |
- Cyanobacteriota
- "Margulisiibacteriota"
- "Marinamargulisbacteria"
- "Riflemargulisbacteria"
- "Saganbacteria"
- "Termititenacia"
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Firmicutes
BV3
Low GC |
- Bacillota
- Bacillota A
- "Clostridiia"
- "Thermoanaerobacteria"
- Thermosediminibacteria
- Bacillota D
- Bacillota E
- Sulfobacillia
- Symbiobacteriia
- Thermaerobacteria
- Bacillota G
- "Hydrogenisporia"
- Limnochordia
- "Desulfotomaculota"
- "Carboxydocellia"
- "Carboxydothermia"
- "Dehalobacteriia"
- Desulfitobacteriia
- Desulfotomaculia
- "Moorellia"
- Peptococcia
- Syntrophomonadia
- Thermincolia
- "Halanaerobiaeota"
- "Selenobacteria"
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| CPR group | |
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| Thermotogida | |
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| Fusobacterida | |
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Hydrobacteria
BV2, BV4 | |
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| others | |
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